HomeCLC FAQ - Analyses-related questionsTracksCan chromosomes downloaded from NCBI be used as a track-based reference?

4.3. Can chromosomes downloaded from NCBI be used as a track-based reference?

Sequences downloaded and imported using the tool:

   Download | Search for Sequences at NCBI

are imported as stand-alone sequence objects or sequence lists.

These are easily converted to tracks by using the tool:

   Toolbox | Tracks | Convert to tracks

You can download any set of sequences and convert them to Tracks if you wish.

 

Relevant manual links

Searching and downloading sequences from GenBank - the NCBI Entrez database:

http://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Search_Sequences_at_NCBI.html

 

Converting to tracks:

http://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Convert_Tracks.html

 

Knowledge Tags

This page was: Helpful | Not Helpful